Microbiology Methods for ERP Review 3-2020

122

GENE-UP SLM Matrix Extension

June 19, 2017

Stock collection # SAFE 82 SAFE 83 SAFE 84 SAFE 85 SAFE 86 SAFE 87 SAFE 88 SAFE 89 SAFE 90 SAFE 91 SAFE 92 SAFE 93 SAFE 94 SAFE 95 SAFE 96 SAFE 97 SAFE 98 SAFE 99 SAFE 100 SAFE 101

Strain #

Salmonella enterica Serotype

Antigenic Properties

Source

Origin

Result

82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99

Saphra

16:y:1,5 11:r:e,n,x 17:1,v:1,5 30:b:e,n,x

CFSAN CFSAN CFSAN CFSAN CFSAN CFSAN CFSAN CFSAN CFSAN CFSAN CFSAN CFSAN CFSAN CFSAN CFSAN CFSAN CFSAN CFSAN CFSAN CFSAN ATCC b

Food isolate Food isolate Food isolate Food isolate Food isolate Food isolate Food isolate Food isolate Food isolate Food isolate Food isolate Food isolate Food isolate Food isolate Food isolate Food isolate Food isolate Food isolate Food isolate Food isolate Clinical Isolate

Positive Positive Positive Positive Positive Positive Positive Positive Positive Positive Positive Positive Positive Positive Positive Positive Positive Positive Positive Positive Positive Positive Positive Positive Positive Positive Positive Positive Positive Positive Positive Positive Positive Positive Positive Positive Positive Positive Positive Positive Positive

Rubislaw Michigan Urbana Vietnam Tornow

41:b:z6

45:g,m,[s],[t]

Gera

1,42:,z4,z23:1,6

Fresno

9,46:z38

Brisbane

28:z:e,n,z15

Agona

1,4,[5],12:f,g,s:[1,2]:[z27], [z45}

Muenchen Seftenberg Muenster Montevideo Johannesburg

6,8:d:1,2

1,3,9:g,[s],t

3,{10},{15}, {15,34}:e,h:1,5:[z48]

6,7,14:g,m,[p],s:[1,2,7}

1,40:b:e,n,x

Javiana

1,9,12:1,z28:1,5:[R1…]

Inverness

38:k:1,6

Cubana

1,13,23:z29:[z37],[z43]

100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122

Cerro

6,14,18:z4,z23:[1,5]:[z45],[z82]

Alachua Florida

35:z4,z23:[z37],[z45] [1],6,14,[25];d;1,7

105801 105802 105817 106305 106346 110274 111560 112762 115142 115461 115977 STS d 24 15805 10241 STS 2 STS 7 STS 11 STS 13 STS 14 STS 16 9270

Gaminara Houtenae Gallinarum

16:d:1,7

ATCC ATCC BMX c BMX ATCC BMX BMX ATCC ATCC ATCC

Unknown Unknown Unknown Unknown

11:z4,z23:  ‐ 

1,9,12

Pullorum

9,12:  ‐  :  ‐ 

Mutant from S1114

Minnesota Livingstone Tennessee Waycross Choleraesuis Bareilly Cubana Zwickau Adelaide Albany Anatum Arkansas Abortusovis

21:b:e,n,x:[z33],z49]

6,7,14:d:1,w

Unknown Unknown Unknown

6,7,14:z29,[1,2,7] 41:z4,z23,[e,n,z15]

6,7:c:1,5

Clinical Isolate

6,7,14:y:1,5

Unknown Unknown

G(1,13,23); z29;  ‐  I(16); r,I; e,n,z15 B(4,12) ; c ; 1,6 C2(8,20); Z4,Z24;  ‐  E1(3,10); e,h; 1,6 E3(3,15,34);e,h; 1,5 D1(1,9,12); [f],g,t;  ‐  O(35) ; f,g ;  ‐ 

UPENN e

ATCC NCTC f

Feces

Reference Lab

UPENN UPENN

Unknown Unknown Pork Liver Unknown Unknown Unknown Unknown

ATCC

UPENN UPENN UPENN UPENN

Berta Binza

E2(3,15); y; 1,5 C2(6,8); r,[i]; 1,5

Bovis ‐ morbificans

7